master s student in bioinformatics

Professional Experiences

Drug design Intern, Faculty of Sciences, Mycology, Pathology, and Biomarkers Laboratory, Tunis, Tunisia February 2025 – In progress

Bioinformatics Intern (Anatomopathology), Tembo Digital Startup, Online - Tunisia August 2024 - August 2024

• Processing and analysis of histopathological images

• Data preparation and normalization for machine learning Molecular Docking Intern, Pasteur Institute of Tunis, Infection Laboratory, Tunis, Tunisia June 2024 - August 2024

• Performing molecular docking simulations on the 6LU7 protein to predict ligand-receptor interactions using AutoDock-Vina

• Analyzing binding affinity scores and selecting the best conformations of protein-ligand complexes

• Visualizing and interpreting molecular interaction results using PyMOL Pathology Intern, Salah Azaiz Institute, Immunohistocytology Laboratory, Tunis, Tunisia February 2023 - March 2023 End-of-year project : Histological Examination Techniques

• Sample preparation and embedding, performing thin sectioning for microscopy

• Application of coloration techniques (Hematoxylin and Eosin)

• Analyzing and observing tissue sections

Biochemistry Intern, National Institute of Nutrition, Tunis, Tunisia June 2022 - July 2022

• Blood sampling and biochemical analysis

Microbiology Intern, RAZI Hospital, Manouba, Tunisia August 2021 – September 2021

Education

Master's in Bioinformatics (Bio-Data-Analytics), National School of Computer Science (ENSI) - Higher Institute of Biotechnology of Sidi Thabet (ISBST) - Pasteur Institute of Tunis (IPT), Tunisia September 2023 – In progress

Bachelor's in Life Sciences, specializing in Molecular and Cellular Biology, Tunisia September 2020 - June 2023

High School Diploma in Experimental Sciences, Tunisia September 2019 - June 2020

Technical Skills

• Genomic data analysis: Prokka, FASTQ, SAMtools

• Programming : R, Python

• Bioinformatics tools : BLAST, TCOFFEE, MAFFT

• Molecular modeling and vizualisation : VMD, PyMOL, Modeller

• Molecular docking tools : AutoDock, AutoDock Vina BISKRI MARIEM

Nationality : Tunisian +216-******** Date of birth : 25/03/2001 Address : Tunis, Tunisie Mail : ************@*****.*** LinkedIn : mariembiskri Github : mbiskri A second-year Master's student in bioinformatics at IPT, ENSI, and ISBST, passionate about integrating information technologies and biological sciences, I am constantly committed to deepening my knowledge and skills through practical and professional experiences. My ambition is to contribute to the advancement of bioinformatics research and to participate in innovative collaborative projects.

• Biological databases : NCBI, Ensembl, UniProt, PubChem

• Protein structure prediction ; AlphaFold, swissmodel

• AI and machine and deep learning algorithms: : KNN, linear regression, RNN, LSTM, GRU, CNN

• Medical image processing

• Statistical computing : R

• Database :MySQL

Soft Skills

• Problem-solving and analytical thinking

• Adaptability and continous learning

• Teamwork and collaboration

• Time management and organsisation

Language Skills

Arabic (native language) French (B2 level) English (C1 level) Certificates

• Biopython

• Cancer biology

• Introduction to genomic technologies

• English language

• Data science and machine learning

• entrepreneurship

Projects

• Retinal image classification using Ensemble Learning (https://github.com/mbiskri/Retinal-image- classification-)

• Brain tumor classification using CNN

• Molecular docking of the 6LU7 protein.

• Comparative structural modeling using α-amylase.

• Molecular dynamic.

• Protein network analysis.

• Bacterial genome data analysis.

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