Internship Experience

Jia Liu

857-***-**** addkes@r.postjobfree.com

Education

Hunan NormalUniversity(HNU), SchoolofLifeSciences Sept. 2015–Jun.2019 Major: Biological Sciences Weighted Average Score:85.15/100 Degree: Bachelor of Science

Boston University(BU), College of Arts& Sciences

Major: Bioinformatics

Degree Expected: Master of Science

Semester GPI: 3.96

Sept. 2019–Jun.2020

Research Exper ience

Build Gut Microbiota-Mental Health Database

Supervised by Zhongcong Xie, Yiying Zhang

Design database

Build help page, help with styling webpage, implemented data download.

Data input from users all the way down to the visualization part MicroarrayBased Tumor Classification

Supervised by Adam Labadorf

Write r script to normalize all microarrays together (use robust multiarray averaging algorithm).

Compute standard quality control metrics and visualize the distribution byPCA Reproduce microbiome paper by python

Supervised by Kirill Korolev

Reproduce the paper by my own code

Do further analysis (by clustering)

Data analysis and demonstration of expression patterns of hybrid crucian carp Supervised by Li Ren

Analysis of expression patterns of homologous genes by r (undergraduatethesis) Research on the Change of Genome Merger in Hybrid of Megalobrama Amblycephala x Culter Alburnus

Supervised by Li Ren

Sorted out experiment data and made relevant figures May.2020

Jan.2020

Nov.2019

June 2019

July 2018

Researched the genome merger in the hybrid of megalobrama amblycephala and culter alburnus Campbell lab (Boston University Medical Campus) intern Jan. 2020 - now Supervised by Joshua Campbell

Test single cell analysis R package ‘celda’. Use ‘celda’ to reproduce results of published paper.

Use publicly available scRNA-seq dataset to test interactive single cell analysis toolkit ‘singleCellTK’. Courses

Application in Bioinformatics

Foundations of Programming, Data Analytics, and Machine Learning in Python Molecular Biology and Biochemistry for Bioinformatics Translational Bioinformatics Seminar

Introduction to R

Biological Database Analysis

Data mining

Applications in Translational Bioinformatics

Foundation of Biostatistics

Cell Biology

Genetics

Professional Skills

Skill: Python, R, SQL, HTML, Weka, JavaScript, CGI Find me in GitHub: jialiu0103 (https://github.com/jialiu0103)