Medical Project

YUNSUP JUNG

**** ***** **. #**** *** Diego, CA 92122

(858) 356 – 7493 ******.*@*****.***

QUALIFICATIONS

Develop and modify software and web system such as C, JAVA, R, Perl, Python and HTML, PHP with Linux (CentOS) and Windows OS for three academic years and one year as an internship.

Experience NGS technique with bioinformatics tools on cloud computer such as AWS.

Experience on basic wet laboratory and Bioinformatics laboratory.

Bilingual in Korean and English.

EDUCATION

Sep. 2015

Bachelor of Science of Bioinformatics, University of California, San Diego.

PROFESSIONAL EXPERIENCES

Jun.2015 to

Current

Mar.2015 to

May.2015

Nov.2014 to

Feb. 2015

Aug. 2014 to

Dec. 2014

Bioinformatics Intern, J.Craig Venter (JCVI)

Participated in USDA web-based Bioinformatics portal to mapping, reading and visualizing animal’s RNA-seq data with Tuxedo tools such as bowtie, tophat, cufflinks, cuffdiff on AWS (using Starcluster and Galaxy with xml).

Web development with HTML and PHP; http://weizhongli-lab.org/RNA-seq/

Research Assistant, UC San Diego CSE Department in Vineet Bafna Lab

Participated in research project "Extra-chromosomal DNA cycle representation" to display sequence similarity and conservation about genomic data.

Created the cycles by Circos (Perl based visualization tool) are represented as human chromosomes of directed segments which are adjacent to each other.

Internship, Sanford-Burnham Medical Research Institute In Bodmer Lab

Participated in research project to develop a GUI application that allow analyzing heart function in the fly and are using this tool to investigate the effects of genetic mutations, aging, sleep, hypoxia and diet on heart performance.

Designed GUI application “GoFlyGo” by Python, in which create adjustable Heat-Mapping to gene name and compound input and create Rate Limiting Step Display with pathway interface reactions.

Authored research paper “Walls, SW, Jung,Yunsup, Bodmer, R. GOFlyGO: GUI-Operated Fly Gene Ontology For Customized Transcriptomic Mapping in Drosophila” (In Progress).

Internship, Sanford-Burnham Medical Research Institute In Lipton Lab

Participated in research project to prevent neuronal apoptosis and to promote neuronal survival and outgrowth during normal aging and various cerebrovascular diseases, including cerebrovascular disease (stroke) and AIDS dementia by using basic molecular signaling pathways.

SKILLS

Program language; C/C++, JAVA, Python, Peal, R, Data analyzing experiences with Pandas(Python), Circos(Perl) and R with Linux (CentOS) and Windows OS.

Web development with HTML and PHP.

NGS technique, Galaxy, Bioinformatics tools; bowtie, tophat, cufflinks, cuffdiff.

Clouding computer; AWS (Amazon Web Service), Starcluster.

Lab techniques including PCR, gel electrophoresis, SDS-PAGE, LDH assay, restriction enzyme analysis, protein purification, ethanol precipitation, Immunostaining and ELISA anti-body.

ADDITIONAL INFORMATION

Korean-American Scientists and Engineers Association (KSEA), Student Mentorship,

University of California, San Diego, San Diego, CA

NAVY DIVER (SSU), Salvage Team, Jin-Hae, Korea.

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