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ANNA PURNA E 's Resume in MS-Word (2003) format

Resume / CV

ANNA PURNA E.

#*, *** A Cross

Manorayanapalya

R T Nagar (Post)

Bangalore – 560 032

Contact nos:

Res: +91-80-236*****

Mob: +91-984**-*****

Email: *************@*****.***

Objective:

To contribute to the field of Biology by sharing my knowledge and combining my Industry Experience to bridge the gap between Theory and Practice.

Experience: 4 Years and 8 months (2 Years 4 months – Database Curation; 2 Years 4 months – Teaching)

Good knowledge of the Curation Aspects in Bio-informatics

Good Presentation Skills

Organizations worked with:

November 2007- To July 2009 (1year and 9 months): Biobase Databases, Crescent Road, Bangalore

Role: Scientific Curator

April 2004-October 2004 (7 months): Institute of Bio-informatics, Bangalore

Role: Research Trainee

August 2003 – December 2003 (4 months): Biomed Informatics, Medwin Hospitals, Hyderabad

Role: Research Analyst cum Trainer

March 2003 – August 2003 (6 months): Software Solutions Integrated (SSi)

Role: Associate Trainer

September 2002 – March 2003 (6 months): Amity Resources (P) Ltd., Bio-informatics Institute of India, Chennai

Role: Research Analyst cum Trainer

June 2001 – June 2002 (12 months): DAV Chandrashekharpur School, Rupnarayanapur, Chittaranjan,West Bengal.

Role: School Teacher

Academic Qualification:

Degree

University/ Institute

Period

P.G.Diploma in Bio-Informatics

Small Industries Service Institute (SISI), Chennai, Tamil Nadu

Jul 2002 – Jan 2003

M.Sc. Biochemistry

Nagarjuna University, Guntur, Andhra Pradesh

Aug 1998 – Apr 2000

PG Certificate Course in Nutrition

National Institute of Nutrition, Hyderabad, Andhra Pradesh

Jan 2001 – Mar 2001

B.Sc., B.Ed.

(Chemistry, Botany, Zoology)

Regional Institute of Education,Bhubaneswar, Orissa

Jun 1994 – Apr 1998

Software Skills:

Operating Systems

Windows XP, Linux

Languages

C, PHP, HTML, XML

RDBMS

MySql

Bio-informatics Software Exposure

Blast, Fasta, PHYLIP, EMBOSS, SPDBV, RASMOL, Clustal–W, Protein Structure Prediction and Analysis Programs, BioEdit, HEX, Chime. Laboratory Experience:

Well acquainted with techniques like HPLC, SDS-Page Electrophoresis and SRID.

Projects:

Title

Annotating scientific research papers related to

1)Immune responses in human beings

2)Effect of Leishmania major in human beings

3)Role of integrins in human beings

21 Months (From Nov 2007 To July 2009)

Team size

12

Role

Annotation and curation of proteins involved in human inflammatory responses.

Description

Curating the scientific literature related to immune response and integrins which ultimately builds up the signaling pathway in human beings.

Title

Plasma Proteome Database Creation

Annotation and Review of plasma proteins

Description

The Plasma Proteome project was initiated by HUPO, where plasma proteins were characterized and multiple peptides were identified.

Plasma Proteome Database Creation involved annotation of the above plasma proteins. Plasma Proteome Database is a web-based resource that contains a functional annotation of all these plasma proteins. The database can be accessed at

Title

Human Protein Reference Database (HPRD)

Client

NCBI

Software

XML, JAVA, ZOPE

Data-mining, Annotation and Curation of various proteins in

HPRD by intensive literature survey

Description

HPRD is an object database that integrates information relevant to the function of human proteins in health and diseases. Data pertaining to protein-protein Interactions, Post-translational modifications, Enzyme-substrate relationships were extracted from the literature. (www.hprd.org)

Title

Intra-cellular Signaling Pathways

Literature Survey, Annotation, Feeding information in Biopax format, drawing Genmap and Validation using PSI-MI format.

Description

This project studies the binding of Signaling Molecules (Enzymes and Hormones) with the receptors or substrates, with the aim of finding the genetic implication of the reaction. My role was the annotation of intermediate molecules and creation of the signaling pathway. Information was fed in Biopax format and genmap was generated. The entire pathway was validated using the PSI-MI format.

Title

Bioce

Client

Amity Resources (P) Ltd., Bio-Informatics Institute of India, Chennai

Software

HTML, PHP, C, Java and MySql

Guiding the software personnel to understand the Biological applications of the software and analyzing the reports and results with other software.

Description

This project deals with the Molecular Dynamics part of Drug Design. The aim of the project was to find a peptide with the desired amino acids having the least energy state for maximum stability. Bioce software, a freeware which provides a platform for simulation of molecules and joining amino acids to form peptides, was used. It allows calculation of energy states for various rotations.

Title

Protein – Ligand Database

Client

Amity Resources (P) Ltd., Bio-Informatics Institute of

Collecting data related to autoimmune diseases, isolating the target protein and analyzing the structure of protein using various Protein Analysis and Structure Prediction tools.

Description

This database contains the information of the target Proteins in Autoimmune diseases and their respective Ligands.

Other Projects:

Estimation of Vit ‘A’ and Vit ‘E’ levels through HPLC techniques during the Certificate Course at National Institute of Nutrition.

Myasthenia gravis, an autoimmune disease-this was the bio project under Bio-informatics course in which my task was to determine the active site and predict the structure of acetyl choline receptor which gets mainly affected inmyasthenia gravis and also to study the reasons for molecular mimicry

Transcription- As a computer project during my Bio-informatics course my task was to build an interface using PHP. The program for transcription was written using C language

Publications worked on

1) Plasma Proteome Database as a Community Resource for Proteomics (published in Proteomics 2005, 5, 0000–0000)

2) Development of Human Protein Reference Database as an Initial Platform for Approaching Systems Biology in Humans (expected to be published in genome research in Jan 2006)

3) A paper on genetically modified foods in "NUTRITION", the quarterly magazine of National Institute of Nutrition, Hyderabad. (Published in April 2001)

Seminars Attended

A Seminar-cum-Workshop on Bio-informatics was organized by Central Sericulture Training and Research Institute at Mysore

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ANNA PURNA E.

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