Assistant Engineering

Debjit Ray

**********@***.***

Cell: 972-***-****.

Homepage: https://sites.google.com/site/debjitray26/

RESEARCH INTERESTS

Mathematical models, computational biology, bioinformatics, next generation

sequencing and biological data mining.

EDUCATION

Fall 2009 - PhD, Biosystems Engineering Washington State University, Pullman

Present WA.

GPA: 3.69/4.00 (Expected Novenmber, 2013)

2007-2009 M. Tech, Bioinformatics, West Bengal University of Technology,

Kolkata, India. GPA: 3.80/4.00

2003 - 2007 B. Tech, Biotechnology, West Bengal University of Technology,

Kolkata, India. GPA: 4.00/4.00

PROFESSIONAL EXPERIENCE

Spring 2013 - Research Assistant, Genomics Core, Washington State

Present University, Pullman WA.

Fall 2012 Teaching Assistant, School of Molecular Biosciences,

Washington State University, Pullman WA.

Spring 2010 - 2012 Research Assistant, School of Molecular Biosciences,

Washington State University, Pullman WA.

TECHNICAL SKILLS

Programming Languages Perl, Bio-Perl, Python, C, C++

NGS Tools Galaxy, Robina, Tophat, Bowtie, Bam/Samtools, Cufflinks,

Bioinformatics Software ImageJ, MacVector, CellDesigner, GROMACS, AutoDock,

Primer3

Statistical Software R, Bio-conductor, MATLAB, Scilab

Scripting Tools Bash shell, High performance computing

Database Oracle SQL

Wet Lab Experience Tissue culture, animal breeding, imaging, histology

studies, immunohistochemistry, PCR

RESEARCH PROJECTS

Agent based model An agent based model for mouse spermatogenic cycles

School of Molecular Biosciences

Washington State University, Pullman, WA, USA

Ordinary Dynamic modeling of yeast meiotic initiation using the ODE

differential model

equation model School of Molecular Biosciences

Washington State University, Pullman, WA, USA

Machine learning Identification of germ cell specific expression pattern

School of Molecular Biosciences

Washington State University, Pullman, WA, USA

Flux balance Elucidating genes and pathways required for meiosis in yeast

analysis and mammals

School of Molecular Biosciences

Washington State University, Pullman, WA, USA

Metabolic Metabolic Pathway Analysis Using Flux balance Analysis

Engineering Indian Statistical Institute

Kolkata, India

Chemical Biology Eco-friendly synthesis and study of new plant growth promoters:

3,3'-Diindolylmethane(DIM) and its derivatives

Department of Medicinal Chemistry

Indian Institute Of Chemical Biology

Kolkata, India

Ecology and waste Waste water management Using Microorganisms

water management Bengal College of Engineering & Technology and

National Institute of Technology

Durgapur, India

Biosensors and Manufacture of Biosensors and their Applications

medical Department Of Polymer Science & Technology

applications University College Of Science & Technology.

Kolkata, India

SELECTED PUBLICATIONS

1. Ray D, Ye P. Characterization of the Metabolic Requirements in

Yeast Meiosis. Plos One, PONE-D-12-33577R1.

2. Ray D, Su Y, Ye P. Dynamic modeling of yeast meiotic initiation.

BMC Systems Biolgy, MS: 1485434533876828.

3. Li Y, Ray D, Ye P. Identification of germ cell-specific genes in

mammalian meiotic prophase. BMC Bioinformatics, 2013, 14:72.

4. Ray D, Hogarth CA, Evans EB, An W, Griswold MD, Ye P. Experimental

validation of Ankrd17 and Anapc10, two novel meiotic genes

predicted by computational models in mice. Biology of

Reproduction, 2012, 86(4):102.

5. Pal C, Dey S, Mahato SK, Vinayagam J, Pradhan PK, Giri VS,

Jaisankar P, Hossain T, Baruri S, Ray D, Biswas SM. Eco-friendly

synthesis and study of new plant growth promoters: 3,3'-

Diindolylmethane and its derivatives. Bioorg Med Chem Lett. 2007

Sep 1;17(17):4924-8. Epub 2007 Jun 10.

PROFESSIONAL ACTIVITIES

Senator Graduate and Professional Students Association (GPSA) for

Biological Systems Engineering

Contact this candidate