Experience

Asma Sindhoo, PhD

BIOINFORMATICIAN/ COMPUTER SCIENTIST

Highly skilled bioinformatics professional with expertise in developing and utilizing biological databases for analyzing large-scale data. I am committed to advancing scientific knowledge, improving patient outcomes through innovative data-driven approaches, and developing robust biological databases. ady7fk@r.postjobfree.com +923*********

u.cn

https://www.linkedin.com/in/asma-

sindhoo-nangraj-93799031/

Visiting Lecturer at SMI University, Pakistan

Taught Artificial Intelligence, Programming for AI, Data mining, ICT, Mobile App Development, Agent-based modeling, and Data mining to BSAI students. Conducted classes, quizzes, exams, and labs

Conducted Labs to incorporate technical methods

Supervised students for final semester projects

2021 - 2023

AI developer at Information and Communication Technology (ICT) Agricultural Extension Services Center

Contributed in various agriculture based prediction projects Collected images and built an image detection model Worked on a prediction model

Facilitate farmers with technological learnings

2020 - 2021

Internship as Teaching Assistant at Isra University Taught Digital Logic Design and visual programming Conducted classes, quizzes, and exams

2012 - 2013

Software developer at Server4Sale

Modify existing software to correct errors.

Provide consultancy and give directions to the testing team. Supervise junior programmers and guide different tasks. Coordinate system installation team for software integration/implementation. Provide documentation

2014 - 2015

Hub Gene Signatures Shared Between Barrett's Esophagus and Esophageal Adenocarcinoma Insights Into Mutations Induced Conformational Changes and Rearrangement of Fe2+ Ion in pncA Gene of Mycobacterium tuberculosis to Decipher the Mechanism of Resistance to Pyrazinamide ESOMiR: Database of miRNA and targeted genes associated with Esophageal Cancer Insect diagnosis and pesticide recommendation system Evaluation of Task manager using Usability test: TaskDo mobile Application Marksheet Information System

Projects

Bioinformatics analysis

Python, R, OOP

Machine Learning/Deep Learning

Communication Skill

Problem-solving

Collaboration and communication

Research proposal development

Research design

Skills

Education

2015-2023

Isra University

Masters of Science, Computer Science

GPA: 3.10

2011-2015

Shanghai Jiao Tong University

PhD., Biology (Major:Bioinformatics)

GPA: 3.63

Sindh Agriculture University

Bachelor of Science, Information Technology

GPA: 3.88 (Chancellors Gold Medal)

2005-2010

Publications

Nangraj, A. S., Selvaraj, G., Kaliamurthi, S., Kaushik, A. C., Cho, W. C., & Wei, D. Q. (2020). Integrated PPI-and WGCNA-Retrieval of Hub Gene Signatures Shared Between Barrett's Esophagus and Esophageal Adenocarcinoma. Frontiers in Pharmacology, 11. Nangraj, A. S., Khan, A., Umbreen, S., Sahar, S., Arshad, M., Younas, S., ... & Wei, D. Q. (2021). Insights into mutations induced conformational changes and rearrangement of Fe2+ ion in pncA gene of Mycobacterium Tuberculosis to decipher the mechanism of resistance to pyrazinamide. Frontiers in molecular biosciences, 8. Nangraj, A. S., Nangraj, S. S., Khan, A., ., Selvaraj, G., Kaliamurthi, S., & Wei, D. Q. (2022). ESOMIR: A cognate database for esophageal cancer (Accepted)

Nangraj, A. S., Selvaraj, G., Kaliamurthi, S., Nangraj, S. S., & Wei, D. Q. (2022). (Review)Role of MiRNA in esophageal cancer in light of hallmark of cancer (To be submitted)

Taouali W, Alimi K, Nangraj A.S., Casida M.E (2023). Density-Functional Theory (DFT) and Time-Dependent DFT Study of the Chemical and Physical Origins of Key Photoproperties of End-Group Derivatives of the Nonfullerene Bulk Heterojunction Organic Solar Cell Acceptor Molecule IDIC. arXiv preprint arXiv:2305.18085. Kaushik, A. C., Gautam, D., Nangraj, A. S., Wei, D. Q., & Sahi, S. (2019). Protection of Primary Dopaminergic Midbrain Neurons Through Impact of Small Molecules Using Virtual Screening of GPR139 Supported by Molecular Dynamic Simulation and Systems Biology. Interdisciplinary Sciences: Computational Life Sciences, 11(2), 247-257. Junaid, M., Shah, M., Khan, A., Li, C.D., Khan, M.T., Kaushik, A.C., Ali, A., Mehmood, A., Nangraj, A.S., Choi, S. and Wei, D.Q., 2018. Structural-dynamic insights into the H.pylori cytotoxin-associated gene A (CagA) and its abrogation to interact with the tumor suppressor protein ASPP2 using decoy peptides. Journal of Biomolecular Structure and Dynamics. Kaliamurthi, S., Selvaraj, G., Chinnasamy, S., Wang, Q., Nangraj, A. S., Cho, W., ... & Wei, D. Q. (2019). Exploring the papillomaviral proteome to identify potential candidates for a chimeric vaccine against cervix papilloma using immunomics and computational structural vaccinology. Viruses, 11(1), 63.

Kaliamurthi, S., Selvaraj, G., Chinnasamy, S., Wang, Q., Nangraj, A. S., Cho, W. C., ... & Wei, D. Q. (2019). Immunomics Datasets and Tools: To Identify Potential Epitope Segments for Designing Chimeric Vaccine Candidate to Cervix Papilloma. Data, 4(1), 31. 9.Chinnasamy, S., Selvaraj, G., Kaushik, A. C., Kaliamurthi, S., Nangraj, A. S., Selvaraj, C., ... & Wei, D. Q. (2019). Identification of potent inhibitors against Aurora kinase A using molecular docking and molecular dynamics simulation studies. Huang, S., Wei, Y. K., Kaliamurthi, S., Cao, Y., Nangraj, A. S., Sui, X., ... & Shi, J. (2020). Circulating miR-1246 targeting UBE2C, TNNI3, TRAIP, UCHL1 genes and key pathways as a potential biomarker for lung adenocarcinoma: integrated biological network analysis. Journal of Personalized Medicine, 10(4), 162.

Nangraj, S. S., Abbasi, S., Pathan, M., & Sindhoo, A. Method as a Service (MaaS) cloud computing solution for usability and interoperability of methods. In 2017 4th IEEE International Conference on Engineering Technologies and Applied Sciences

(ICETAS) (pp. 1-6). IEEE.

1.

2.

3.

4.

5.

6.

7.

8.

9.

10.

11.

12.

Contact this candidate