Jakub ‘Kuba’ Bartkowiak
acxaf4@r.postjobfree.com (717) 578 – 6849 3128 Suncrest Village Ln Raleigh NC
Objective
To obtain a long-term position as a laboratory technician, or its equivalent, particularly in order to apply my skills in biotechnology and extensive experience in lab management, environmental health, and pharmacology research. I hope to resume my work in these fields and further my abilities in molecular and experimental biology, likewise participating in writing research publications, development of experimental protocols and collation/organization of vital scientific data, and the training and management of new employees and interns
Education
Virginia Commonwealth University - Medical College of Virginia Richmond, VA
VCU School of Medicine, 2013 – 2015
University of Miami Coral Gables, FL
Bachelor of Science, May 2011
summa cum laude, with general honors
Major in Neurobiology, Minors in Mathematics and Organic Chemistry
Skills & Abilities
Number of experiences presenting research data to groups (ranging from 10-150+ individuals) and enjoy public speaking
6+ years of applying basic laboratory techniques such as use of standard and electronic pipets, dilution or preparation of solutions, use of -80C freezers, centrifuges, chromatography columns (in several contexts), among various others
Use of most standard microbiology and molecular biology lab techniques and associated equipment, including isolation of bacteria and maintenance of culture isolates in standard, selective or anaerobic, and liquid media
Extensive experience (4+ years) with standard and quantitative [real-time] PCR, including equipment maintenance and calibration, construction of standard curves and related internal controls, in addition to gel electrophoresis, preparation of samples and reagents (e.g. DNA and RNA sample extraction and handling from bacteria and tissue), primer and probe design, ELISA, and general experimental assay design and data analysis
Strong familiarity in properly documenting both experimental results and designing SOPs, as well as contributing to publications
Behavioral testing and scoring/coding of anxiety-related and other stereotyped behaviors in rats & mice
Long-term experience with testing of novel nicotinic compounds and mapping of olfactory receptor systems through expression in Xenopus oocytes [co-expressing the CFTR anion channel] and assay via Twin-electrode voltage clamping
Work with monoamine and dopamine transporter function in oocytes in addition to investigation of the anatomical differences in sensitivity, tolerance, and muscle tension in mouse intestinal tracts in response to long-acting opioids
Use and fundamental understanding of the mathematical underpinnings of statistical software packages such as Minitab, including programming in R and use of such software as PRISM in preparation of publications
Fully proficient with all Microsoft Office Suite software, including Word, Excel, and PowerPoint
Strong knowledge of Windows (3.1 through 10)- and DOS-based systems, including original installation and setup, advanced software/hardware trouble-shooting, and development of scripting tools for the automation of Windows- and Excel-based computer tasks
Research & Work Experience Please Note: References Available on Request
Virginia Commonwealth University – School of Medicine & Graduate School Richmond, VA
Graduate intern & Teaching assistant, 7/2013-12/2015
Completed extensive clinical medicine-associated and graduate-level coursework, developing an understanding of the use and challenges involved in development of contemporary medical devices, the entirety of human anatomy and clinical treatment of disease, molecular biology-based diagnostics, and pharmaceutical development and testing
Strong understanding of pharmacological treatment of microbial, oncological, and autoimmune disease
Completed several rotations in neuroscience, pharmacology, and biophysics-oriented laboratories, evolving my technical skills in a variety of molecular techniques and various types of assays in rodent models – which in addition to the above include western blots, plasmid preparation, transfection, and even working with potentially hazardous chemicals
University of Miami Miller School of Medicine – Miami, FL
Department of Molecular and Cellular Pharmacology
Research Associate I, 7/2011- 6/2012
Analyzed electrophysiology data for the characterization and classification of olfactory receptors, greatly improving my practical understanding of statistical analysis, as well as the use of common commercial statistical software packages and subsequent graphical representation using PRISM and related applications
Collaborated extensively with fellow lab members on long-term odorant screening effort, greatly improving upon my communication and organizational skills for efficient coordination of team research efforts and compilation of experimental data – particularly in regard to development of SOPs and data preservation
Developed extensive familiarity with a variety of molecular biology techniques for the [PCR-based] isolation, amplification, sequencing, and subsequent functional expression of cloned mouse olfactory receptors in Xenopus Oocytes via production of engineered mRNAs from previously isolated bacterial plasmids
Programmed and maintained the robotic OpusXpress electrophysiology (TEVC) workstation for high-throughput screening of olfactory [GPCR] receptors plus other poorly characterized ion-channel receptors
Neuroscience Research Fellow, 5/2008 – 4/2011 [concurrent position]
Helped oversee lab’s long-term nicotinic receptor-ligand screening project
Assisted in iterative development of lead compounds, helping direct modifications to the base compound (epibatidine) structure to achieve better receptor-subtype selectivity or efficacy
NOAA Atlantic and Oceanographic Meteorological Laboratory –
Applied Environmental Microbiology Lab (Key Biscayne) Miami, FL
Primary Research Assistant, 11/2007 - 6/2011
Managed training and assisting incoming (2-5) students and summer interns in a variety of basic lab techniques, lab safety, and proper handling of microbial samples
Collected, processed, and analyzed water, soil, and tissue samples, via both traditional plating methods for bacterial cultures as well as with molecular techniques including DNA chromatography columns & qPCR
Maintained and organized microbiology lab and related equipment, gaining valuable experience in lab management – particularly in regard to aseptic technique in handling of potential pathogens and prevention of [equipment or operator] cross-contamination
Led several projects for the development and validation of novel qPCR assays targeting host-specific strains of fecal indicator bacteria (including dog, gull, and human associated strains)
Actively participated in ongoing research efforts, often on an individual basis, including the maintenance of culture/DNA databases, preparation of DNA extracts for downstream analysis from bacterial or tissue samples, and water bacterial load analysis by qPCR or other techniques for the Florida Department of Health – greatly developing my time-management skills and instilling a strong sense of personal responsibility in needed tasks
Designed and conducted original experiments in non-traditional research environments (e.g. Coast Guard research vessel) as well as for ongoing cross-lab validation efforts in emerging techniques and data analysis
Publications
Bartkowiak, J., Wanless, D., Goodwin, K., Sinigalliano, C. Analysis of DNA extraction efficiency for quantitative PCR using commercial binding-matrix purification. Poster session presented at: 109th General Meeting of the American Society of Microbiology; 2009 May 17-21; Philadelphia, PA
Ondachi, P. W., Castro, A. H., Bartkowiak, J. M., Luetje, C. W., Damaj, M. I., Mascarella, S. W., Carroll, F. I. Synthesis, nicotinic acetylcholine receptor binding, and antinociceptive properties of 2’-fluoro-3'-(substituted pyridinyl)-7-deschloroepibatidine analogues. Journal of Medicinal Chemistry (2014), doi:10.1021/jm401602p
Schriewer, A., Goodwin, K.D., Sinigalliano, C.D., Cox, A.M., Wanless, D., Bartkowiak, J., Ebentier, D.L., Hanley, K.T., Ervin, J., Deering, L.A., Shanks, O.C., Peed, L.A., Meijer, W.G., Griffith, J.F., SantoDomingo, J., Jay, J.A., Holden, P.A., Wuertz, S. Performance evaluation of canine-associated Bacteroidalesassays in a multi-laboratory comparison study, Water Research(2013), doi:10.1016/j.watres.2013.03.062
Sinigalliano C.D., Fleisher J.M., Gidley M.L., Solo-Gabriele H.M., Shibata T., Plano L.R.W., Elmir S.M., Wanless, D., Bartkowiak, J., Boiteau, R., Withum, K., Abdelzaher, A.M., He, G., Ortega, C., Zhu, G., Wright, M.E., Kish, J., Hollenbeck, J., Scott, T., Backer, L.C., Fleming L.E. Traditional and molecular analyses for fecal indicator bacteria in non-point source subtropical recreational marine waters, Water Research(2010), doi: 10.1016/j.watres.2010.04.026
Sinigalliano, C.D., Ervin, J., Van De Werfhorst, L.C., Badgley, B., Ballesté, E., Bartkowiak, J., Boehm, A.B., Byappanahalli, M., Goodwin, K.D., Gourmelon, M., Griffith, J., Holden, P.A., Jay, J., Layton, B., Lee, C., Lee, J., Meijer, W.G., Noble, R., Raith, M., Ryu, H., Sadowsky, M.J., Schriewer, A., Wang, D., Wanless, D., Whitman, R., Wuertz, S., Santo Domingo, J.W., Multi-Laboratory Evaluations of the Performance of Catellicoccus marimammalium PCR Assays Developed to Target Gull Fecal Sources, Water Research(2013), doi:10.1016/j.watres.2013.02.059