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Engineer Medical

Location:
Henrico, VA, 23228
Posted:
July 30, 2015

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Resume:

SUMMARY

I am current looking for work as a Database Engineer. I like to work with large datasets and have utilized a number of RDBMS and NoSQL technologies to store and analyze them. My experience managing all aspects of software development from using Agile techniques such as Scrum or Kanban. I'm also a strong developer and have created software pipelines using various languages and web applications using Django/RoR and PHP. I am well versed in a variety of programming languages and seek to use the skills to provide full stack development and web front ends.

EXPERIENCE

Virginia Commonwealth University 08 / 2014 - Present

Bioinformatics Programmer/DBA & Big Data Specialist/Research Assistant

Database administrator and programmer for various micorbiome projects allowed me to design and implement Python Pipelines and REST API to perform metagenomic analysis then analyze and visualize the data within R and Django. I also engineered and adminsitrated databases to store clinical and biological data within MySQL/PostgreSQL as well as Cassandra, MongoDB and Hadoop/Hive. Each of these solutions was hand tested and the solution applied based on actual performan analytics. Other jobs included performance tuning of PostgreSQL and MySQL RDBMS optimization techniques at both an application and database level. Created a proof of principle model using Apache Hadoop (2.6.0) and Hive (0.14) as well as PostgreSQL Hadoop Foreign Data Wrapper using a small cluster of machines to handle Illumina 16S sequence data. Then diversified the pipeline to also handle Cassandra and MongoDB in a Microsoft Azure Cloud environment, this test data contained multiple data sets stored either in Postgres (smaller tables) or Hive (Largest table contained 80 billion rows).

Unix/Solaris Engineer and Security Analyst, Tangible Software 09 / 2009 - 09 / 2010

Held a Security Clearance and worked on Public Key Interface. Duties included writing change requests (CR) after using penetration testing techniques to identify RDBMS or OS vunlerabilities. This included managing security logs, intrusion detection and honey pot data, as well as analysis to identify potential threats. A change requests included authoring Perl, MS VBS, Unix/Solaris shell scripts and supporting technical documentation to check, and patch/repair or update to manage security vulnerabilities or adjust firewall/OS settings to prevent intrusions.

President, TAG IT Solutions, LLC 06 / 2004 - 09 / 2009

Started as simple contracts, progressed into a LLC in 2005. Initially focused on web authoring and hosting, progressed into multiple contracts, subcontracts, and employees handling large property management companies. Maintained and hosted Scalix and Exchange e-mail solutions. MSSQL, Oracle and PostgreSQL Database servers. Trained employees of multiple companies on Windows desktops and Citrix shared app ications. Performed data recovery services on desktop and server hard-drives (SCSI/SATA and IDE devices). Formed a specialized group and offered network penetration testing services using metasploit and other tools to test and patch vulnerabilities.

CPR, ACLS, PALS and National Registry EMT/Paramedic Instructor, Associates in Emergency Care 08 / 2011 - Present

Educated new and recertifying EMT Intermediate and Paramedic students in subjects such as pathophysiology, anatomy and physiology, capnography, 12-lead ECGs and other parts of the NREMT curriculum. Taugh all levels of AHA CPR, ACLS and PALS curriculum to Doctors, Nurses, LPNs, Paramedics and EMTs

Paramedic, Richmond Ambulance Authority 12 / 2012 - 05 / 2015

Lead Paramedic who works alongside an EMT partner to provide Emergency Medical Services (EMS) in the busiest per capita EMS system in the world Involved in community outreach through health screenings, sporting events, and festivals/gatherings

EMT Instructor, Training 911 07 / 2010 - 01 / 2014

Taught Virginia EMT-B and First Responder students: Topics include anatomy and physiology, patient assessment/management (medical & trauma), spinal immobilization techniques, splinting, airway management, and CPR

SCUBA Repair Technician, IT Consultant, Virginia Scuba 03 / 2007 - 06 / 2010

Part-time and Contract work. Managed a point of sale network and online webstore. Provided all levels of desktop and server support.

Repair Technician, SCUBA Instructor, Sales Associate, Leisure Time Recreation d/b/a "The" Dive Shop 06 / 2004 - 03 / 2007

Started as part-time sales associate, promoted to full-time repair technician. Also performed IT work on the point of sale systems and servers (Windows XP, Windows 2000 Server)

SKILLS

Windows Server (2003 – 2012) & MSSQL

Oracle, MySQL and PostgreSQL

Hadoop, Tez, Pig, Spark, Oozie

NoSQL: Cassandra, MongoDB, HBaseProject

Database Design & Optimization (Warehousing, OLTP, OLAP, Query Tuning)

Bioinformatics Programming

Python & Django, R, Perl, MS VBS,

C++ (Object Oriented) & Java

HTML5, JavaScript/jQuery, Bootstrap

Linux/Unix/Solaris Admin & Shell Scripting

GitHub and Subversion

Management – AGILE & KANBAN

Scalix & Microsoft Exchange Administration

Next Generation Sequencing Technologies (454/Illumina)

Research Design

Protein Structure

Protein-protein Interactions

Simulations and Modelling

DNA/RNA sequencing

Metagenomic Analysis

Computational Biology

Multivariate Statistics

High Performance Computing

HIPAA Compliance

Computer Security & Penetration Testing

EDUCATION

Virginia Commonwealth University (Accelerated Masters Program) 2012 – 2015

Master’s Degree, M.S. Bioinformatics & Bachelor’s Degree, B.S. Bioinformatics

Extra Curriculars: Society of Bioinformaticians, VCU Cycling & Triathlon Club

Northern Virginia Community College 2005 – 2012

Associate's Degree, A.A.S. Emergency Medical Services (2012)

Associate's Degree, A.S. Business Administration and Management (2009)

INTERESTS

Big Data, Cycling, Technology, Snowboarding, SCUBA Diving, Surfing, Camping, Hiking, Trail Running, Antibody-Antigen interactions, Reaction Pathways, Systems Biology, Computational Biology, Bioinformatics, Medicine, Nursing, Emergency Medical Services

CERTIFICATIONS

CompTIA A+, CompTIA Network+, CompTIA Security+

AWARDS

Leadership Award - Prince William County Chamber of Commerce and Prince William County Fire and Rescure - March 2013

LANGUAGES

Spanish



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