Vyacheslav Morozov

Analyst - Biostatistician, Bioinformatician, Scientific Programmer

.

objectives

Pursuing a new career in life sciences, I am seeking for a R&D position where a balanced

status

symbiosis of excellent quantitative background, superior analytical skills and knowledge of

Canadian

laboratory platforms, including Next Gen Seq data pipelines are essential

TN1(W2) in US

* experience

ÿ

aca39f@r.postjobfree.com

06.2013 -

T

LinkedIN profile

-01.2013 University of Calgary, Dept. of Biochemistry

+1-613-***-****

& Molecular Biology, Canada Contractor, external

Numerically programmed, proved a new sampling algorithm for multivariate

data tools Markov chain - Monte Carlo simulations, 1000 Genomes data

BLAST. BLAT

current-

GATK, Bowtie

-09.2009 University of Ottawa, Dept. of Biochemistry,

SAMtools,VCFtools

Microbiology & Immunology, Canada Graduate Researcher

NCBI & ExPASy tools

Solved a variety of bio-computational problems in genome and transcriptome

Own & free sources

sequence analysis, protein-DNA interactions, bioinformatics analysis

JMP/ SAS, SPSS

06.2009-

systems -09.2007 BioWarn LLC, Raleigh - Pittsboro, NC, USA DSP Programmer - Analyst

LIMS, MPI, GPGPU Quantitatively analyzed patterns of signals from pathogen bio-sensors

Windows, UNIX/Linux 09.2007-

NPACI Rocks cluster -07.2007 Genome Science Center,

BC Cancer Agency, Vancouver, Canada Freelancer, scientific contributor

resources Collaborated for a new method development for SOLEXA data, developed

ENCODE, Jaspar the seriation algorithm, prepared results for a manuscript

TRANSFAC

07.2007-

FlyBase, InParanoid

-03.2006 Department of Signaling Biology,

UniGene, TiGER

Ontario Cancer Institute, Toronto, Canada Data Analyst

KEGG, DAVID

Analyzed human lung cancer omics data, programmed for research

dbTSS, GO

03/2006-

Pfam, UniPROBE

-06/2004 Banting and Best Department of Medical Research,

UniProt, Swiss-Prot

University of Toronto, Canada Computational Programmer Analyst

presentation Analyzed omics data, developed method for HPLC-MS biomarker project

Photoshop, InkScape 05/2004-

Latex /Tex -10/2002 Interactive Media Lab, University of Toronto, Canada Research Associate

Vector graphics Modeled human-computer interactions in psychoacoustic, consulted

YouTube video

UML, Visio, MS Office

education

programming MSc Bioinformatics (mathematics) GPA 4.0 out of 4.0,University of Ottawa, Canada

R, C/C++, HTML, XML

Computational statistics and machine learning for genome sequence analysis

Matlab /Octave

PhD Econometrics (math and computational methods) Moscow - Kiev

FORTRAN–90

Modeling of scheduling problem, process of adaptive planning and control

SQL, Perl, Java

Eclipse, VS 2008 MSc Mathematics with honor V.N. Karazin Kharkiv National University

Specialization in Mathematical Physics

applications

\ Bioinformatics: ChIP-Seq, RNAseq, Next Generation Sequencing (Illumina), HPLC

MS/MS, gene expression microarrays, protein binding microarrays, protein/gene interac-

tion networks and pathways, sequence and pattern alignments, single nucleotide polymor-

phisms, comparative genomics, molecular phylogenetics, transcription factor - DNA and

epigenetic interactions, human /eukaryotic genomes, biomarkers, rheumatoid arthritis and

cancer omics high throughput data analysis and interpretation

\ Statistics and data mining: data quality controls, parametric/non-parametric methods,

linear, non-linear, logistic regressions, sensitivity/specificity and risk assessments, hypothe-

ses and reliability testing, Markovian, Monte Carlo, Bayesian statistics, MDS, clustering,

principal components, support vector machine, kernel methods, image processing, seg-

mentation, methods of local and global optimization, signal deconvolution, data visualiza-

tion, biostatistics and applications to biological and industrial problems

\ Mathematical modeling: combinatorial algorithms, dynamic programming, predictive

modeling, factor analysis, work flow scheduling, network modeling, multi-criteria optimiza-

tion, processes of control in multi-tier systems, time series analysis, econometrics, system

decomposition and aggregation, processes of self organization and adaptation in complex

systems

publications

\ Morozov, V., Ioshikhes, I. (2013). Optimized position weight matrices in prediction

of novel putative binding sites for transcription factors in the Drosophila melanogaster

genome. PloS one, 8(8): e68712. link

\ Morozov, V. (2012). Computational methods for Inferring transcription factor binding

sites. Master’s thesis. University of Ottawa. 129 p. Available from: UNI, Ann Arbor;

(Publication No AAT). link

\ Morozova, O., Morozov, V., Hoffman, B. G., Helgason, C. D., & Marra, M. A. (2008).

A seriation approach for visualization-driven discovery of co-expression patterns in

Serial Analysis of Gene Expression (SAGE) data. PloS one, 3(9):e3205. link

\ Kraeva, N., Djaiani, G., Morosov, V., Busato, M., Carroll, J., Anderson, B.J., &

Fedorko, L. (2005). GPIaGPIIa Gene Polymorhism and bleeding after cardiac surgery.

Canadian Journal of Anesthesia, 52:A23 link.

awards

Best conference poster award, 2011; Academic awards; International conference

travel award; French government entrepreneurial internship award

teaching

\ Teached: mathematical methods, calculus, linear algebra, University of Ottawa, Canada

\ Consulted: Centre for Intercultural Learning, Toronto-Ottawa \ Facilitated: computer

literacy, Comprehensive Rehabilitation and Mental Health Services (COTA), Toronto, Canada

\ Lectured: econometrics, informatics, forecasting, financial mathematics, Java program-

ming (V.N. Karazin Kharkiv National University, The National University of Pharmacy, Uni-

versity of Construction and Architecture, Ukraine)

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