PRAGNYA (Paku) J. DESAI, MS.
Phone: 760-***-****.
E-mail: abnbgk@r.postjobfree.com
http://www.linkedin.com/pub/paku-desai/a/216/537
Experienced Research Biologist with 8+ years of hands-on experience in drug
discovery activities impacting critical path, with current focus on GPCR
membrane protein biology and non-GPCR inflammatory drug targets. Extensive
assay development and research experience from target identification,
validation to advancing drugs into early drug development.
RESEARCH EXPERIENCE AND SKILLS:
. Nine years of extensive industry experience with small molecule drug
discovery targeting GPCRs to modulate inflammatory drug targets.
. Self-motivated researcher with solid numerical skills and excellent
conceptual grasp of the pharmacology of drug receptor interactions.
In-depth understanding of secondary cellular signaling with
application to the establishment and development of functional
readouts in cell-based assays including proof of concept studies using
primary cells.
. Extensive expertise in establishing, validating and implementing
radioligand receptor binding assays employed for HTS and
primary/secondary screens to support SAR for medicinal chemists.
. Established and validated numerous in vitro functional assays in
mammalian cell lines, primary human and mouse myeloid cells.
. Developed and established fluorescence-based in vitro functional
assays such to monitor cellular adhesion, receptor internalization and
transmigration in human endothelial cells, to understand the
mechanisms of target intervention.
. Broad base of expertise in cell and molecular biology, and
biochemistry:
-molecular cloning including DNA isolation, cloning and recombinant
protein expression, quantitavive RT-PCR, SiRNA-mediated gene knock-
down.
-extensive tissue culture experience including developing and
establishing both transient and stable transfections.
- Immunology and biochemistry techniques including polyacrylamide gel
electrophoresis, western blot analysis, immunoprecipitation, ELISA,
flow cytometry (surface and intracellular staining) FRET, TR-FRET
based and proliferation assays.
-Proficient at data processing and analysis using Excel and GraphPad
Prism.
. Excellent verbal and written communication skills, enthusiastic team
player with critical thinking, multi-tasking and problem solving
abilities that have helped to advance projects.
. Extensive publication and patent filing record.
PROFESSIONAL EXPERIENCE:
Johnson & Johnson Pharmaceutical Research Development, La Jolla, CA,
2001-2010
Senior Associate Scientist, Drug Discovery, Immunology.
. Integral part of a successful cross-disciplinary team of chemists and
biologists that drive small molecule drug programs to clinical trials
for the treatment of inflammatory disorders.
. Contributed very positively on a number of GPCR targets for
inflammation that were in early drug discovery phase or advancing into
early development.
. Solid working knowledge of assay development, including the design and
execution of in vitro assays for HTS for new targets, and primary
assays based on ligand binding and functional readouts in support of
lead identification and optimization efforts.
. Lead role in studying the pharmacological effect of drug candidates in
cellular assays, probing signaling mechanisms such as calcium
mobilization, chemotaxis and the MAPK and AKT kinase pathways in bone
marrow derived mast cells, to dissect target-mediated effects on
mechanisms determining inflammatory cytokine production and migration.
. Developed and established PK/PD biomarker assays for various
inflammatory targets that have or are proceeding into early
development.
. Took a leadership role in a project that was in early development by
coordinating many of the early screening assays. Had a positive impact
on management of the project workflow and the team's readiness to make
decisions to move compounds along the critical path.
. Broadly based skill set that allows me to take on projects that are
very different in nature (target class, validation and screening
strategy).
. Knowledge base has also allowed intellectual contributions to project
teams; and in several instances became the "go to" person for assay
planning and troubleshooting.
. Mentored numerous team members with primary in vitro screening assays,
enabling projects to move forward rapidly and successfully.
Senior Associate Scientist, Genomic technologies. 2000-2001
. Spearheaded quality control and process development in Gene chip micro-
array leading to an HTS platform.
VA Medical Center (VA Medical Research foundation), San Diego, CA, 2000
Senior Research Associate, Department of Infectious Diseases.
. Molecular approaches toward the identification of potential parasitic
stage antigens and their characterization, for the development of a
Coccidioides immitis vaccine.
Boston University School of Medicine, Boston, Massachusetts, 1997-1999
Research Associate, Department of Medicine, section for Infectious
Diseases,
. Lead role in conducting studies identifying the in vitro and in vivo
mechanisms of iron utilization and their role in virulence in Neisseria
gonorrhoeae and Neisseria meningitidis. Work lead to publications 9,
10 and 12 (see publication list).
Morehouse School of Medicine, Atlanta, Georgia, 1992-1997
Research Associate, Department of Microbiology and Immunology
. Lead role in conducting studies identifying the mechanisms of iron
acquisition and transcriptional regulation of iron-regulated genes in
N.gonorrhoeae and N. meningitidis. Work lead to publications 9, 10, 11
and 12 (see publication list).
Tropical Diseases Research Center (World Health Organization)
Ndola, Zambia, 1984-1992.
Scientific officer, Tropical Diseases Research Center, Department of
Microbiology
. Epidemiology of various tropical diseases such as malaria,
shistosomiasis and trypanosomiasis.
. Characterization of the diversity of major merozoite surface antigen
(MSA) in Plasmodium chabaudi chabaudi (VUB, Belgium, Europe).
. Investigation of opportunistic infections in AIDS patients (Ndola,
Zambia).
EDUCATION:
MS (Medical Microbiology) University of London, London School of Hygiene
and Tropical Medicine (LSHTM), London, England
Thesis: The in vitro activity of nine, 4-quinolones and seven standard
antimicrobial agents against 38 Zambian isolates of Neisseria gonorrhoeae
(LSHTM, England).
BS, (Microbiology) University of Bombay, Bombay, India
PUBLICATIONS:
1. Yu, F., Wolin, R.L., Jianmei, W., Desai, P.J., McGovern, P.M.,
Dunford, P. J., Lars Karlsson, L., Edwards, J. P. and R. L. Thurmond.
2009. Pharmacological Characterization of Oxime Agonists of the
Histamine H4 Receptor. Accepted for publication in Journal of
Receptor, Ligand and Channel Research.
2. Desai, P, and R. L. Thurmond. The Histamine H4 receptor (H4R)
Potentiates LPS-induced IL-6 production via synergy in ERK
phosphorylation. In prep.
3. Jiang, W., Lim, H. D., Zhang, M., Desai, P., Dai, H., Colling, P.,
Leurs, R and R. L. Thurmond. 2008. Cloning and Pharmacological
Characterization of the Dog Histamine H4 Receptor. Eur J Pharmacol.
592:26-32.
4. Dunford, P. J., Williams, K. N., Desai, P. J., Karlsson, L., McQueen,
D and R. L. Thurmond. 2007. Histamine H4 receptor antagonists are
superior to traditional antihistamines in the attenuation of
experimental pruritus. J. Allergy Clin Immunol. 119: 176-183.
5. Venable, J., Cai, H., Chai, W., Dvorak, C., Grice, C., Jablanowski,
J., Shah, C., Kwok, A., Ly, K., Pio, B., Wei, J., Desai, P., Jiang,
W., Nguyen, S., Ling, P., Wilson, S., Dunford, P., Thurmond, R.,
Lovenberg, T., Karlsson, L., Carruthers, N. and J. Edwards. 2005.
Preparation and Biological Evaluation of Indole, Benzimidazole, and
Thienopyrrole Piperazine Carboxamides: Potent Human Histamine H4
Antagonists. J Med Chem. 48: 8289-8298.
6. Thurmond R. L., Desai, P. J., Dunford, P. J., Fung-Leung, W.-P,,
Hofstra, C. L., Jiang, W., Baker, S. M., Nguyen, S., Riley, J. P.,
Sun, S., Williams, K. N., Edwards J. P and L. Karlsson. 2004. A
Potent and selective Histamine H4 Receptor Antagonist with Anti-
inflammatory Properties. JPET. 309: 404-413.
7. Jablonowski, J A., Grice, C. A., Chai, W., Dvorak, C. A., Venable, J,
D., Kwok, A. K., Ly, K. S., Wei, J., Baker, S. M., Desai, P J., Jiang,
W., Wilson, S. J., Thurmond, R. L., Karlsson, L., Edwards, J. P.,
Lovenberg, T. W. and N I Carruthers. 2003. The first potent and
selective non-imidazole human histamine H4 receptor antagonists. J
Med Chem. 46 (19): 3957-60.
8. Hofstra, C. L., Desai, P. J., Thurmond, R.L. and W-P. Leung-Fung.
2003. Histamine H4 receptor mediates chemotaxis and calcium
mobilization of mast cells. JPET. 305:1212-1221.
9. Fichorova R N., Desai, P. J., Gibson, F. C and C.A. Genco. 2001.
Distinct proinflammatory host responses to Neisseria gonorrhoeae
infection in immortalized human cervical and vaginal epithelial cells.
Infect and Immun. 69:5840-5848.
10. Desai, P. J., Garges, E and C.A. Genco. 2000. The pathogenic
Neisseria can use hemoglobin, transferrin and lactoferrin
independently of the tonB locus. J. Bacteriol. 182: 5586-5591.
11. Desai, P. J., Angerar, A and C. A. Genco. 1996. Analysis of Fur
binding to operator sequences within the Neisseria gonorrhoeae fbpA
promoter. J. Bacteriol. 178: 5020-5023.
12. Genco, C. and P. J. Desai. 1996. Iron acquisition in the pathogenic
Neisseria. Trends in Microbiology. 4: 179-184.
13. Desai, P. J., Nzeribe, R and C.A. Genco. 1995. Binding and
accumulation of hemin in Neisseria gonorrhoeae. Infect and Immun.
63:4634-4641.
14. Desai, P. J., Morrison, J.A. and A. F. Flemming. 1990. Penicillinase
producing Neisseria gonorrhoeae in Ndola, Zambia. Trans. Royal. Soc.
Trop. Med. Hyg. 84:131.
PRESENTATIONS:
1. Oral presentation at the Annual Johnson & Johnson Science day,
Coronado, San Diego 2002. The Anti-inflammatory action of the target
of interest, for the presentation to early drug evaluation.
2. Annual immunology oral presentations project related to the Immunology
and Chemistry group since 2002 till present and ongoing.
3. Poster presentations at the Annual Johnson & Johnson Science day,
since 2002 till present.
4. The Tenth International Pathogenic Neisseria Conference, November
1998, Nice France. Poster presented: TonB independent utilization of
hemoglobin and transferrin in the pathogenic Neisseria spp and its
role in virulence (Primary author).
5. The Ninth International Pathogenic Neisseria Conference, September
1994, Winchester, England. Posters presented: Characterization of
haemin transport in Neisseria gonorrhoeae (Primary author);
6. XIV International Congress of Microbiology, September 1986,
Manchester, England. Poster presented: The prevalence of
penicillinase producing Neisseria gonorrhoeae (PPNG) in Ndola, Zambia
(Primary author).
PATENTS:
1. Desai, P. J., Dunford, P. J., Hofstra, C. L., Karlsson, L., Fung-
Leung, W. -P., Ling, P and Thurmond, R. L. 2004. Use of Histamine
H4 receptor modulators for the treatment of allergy and asthma.
Janssen Pharmaceutica, N.V. WO 2004/02199 A2
COMMITTEES AFFILIATIONS:
2003-2009: Active continuous member of the Johnson & Johnson PRD-La Jolla
radiation safety committee aiding in improvement of safe science practices.
IMMIGRATION STATUS: US Citizen.