QING JANE LU, Ph.D.
650-***-**** (Home), 650-***-**** (Cell), Foster City, CA
abmqvr@r.postjobfree.com
Medicinal/Synthetic Organic Chemist
. Extensive pharmaceutical industry experience in small molecule drug
discovery/development including hit identification, lead optimization,
structure-based drug design, SAR analysis, ADME, PK/PD, toxicology and
IP; generated clinical and development candidates for treating
inflammation, cardio arrhythmia or antibacterial agents
. Experienced managing CRO collaborations based in US and Asia including
design targets, propose synthetic schemes, solve chemistry issues and
organize weekly teleconference to accelerate the productivity,
coordinate internal and external chemistry work
. Hands-on experience in design, execution and troubleshooting of multi-
step syntheses of natural products and heterocycles, as well as
synthetic methodology development
. Extensive experience in modern purification and characterization
methodologies, skilled in HPLC, LCMS, GILSON and ISCO systems, and
interpretation of various spectra 1D/2D NMR, MS.
. Strong computer skills with experience in MS office (Word, Excel,
Powerpoint), Chem-Draw/ISIS-Draw, Chem Office, SciFinder, Crossfire
PROFESSIONAL EXPERIENCE
Achaogen Inc. South San Francisco Medicinal Chemistry
Consultant Antibacterial Project (LpxC Inhibitors):
2010
. Assisted in transfer of project from research into development;
managed CRO and CMO collaborations in China, monitored the scale-up
work, addressed chemistry issues, handled contracts and negotiated
prices with CRO and CMO companies; coordinated production schedules
to meet the study timelines
Senior Scientist Antibacterial Project (LpxC Inhibitors):
2006-2009
. Responsible for chemistry aspects as a lead chemist in the core
project team; designed and synthesized new inhibitors; performed SAR
analysis and selected compounds for biological studies; produced
potential development candidates with big improvement in animal
efficacy, responsible for analyzing existing IP and writing patent
applications with legal support
. Managed CRO collaborations in US and Asia (up to 18 FTE): design
targets, propose synthetic schemes, solve chemistry issue and organize
weekly teleconference; coordinated the internal and external chemistry
work, supervised one senior RA internally
Scios, Inc. (a J&J company) Fremont, CA Medicinal Chemistry
1999-2006
Senior Scientist II Oct. 2005
Senior Scientist Sept. 2000
Scientist May. 1999
CaM Kinase II Project:
. Started from primary high throughput screens and hit identification,
designed and synthesized CaMKII inhibitors for treating cardio
arrhythmia; addressed issues of potency, cell activity, selectivity,
stability, PK and hERG profiles; developed two first-in-class
scaffolds with good potency in rabbit arrhythmia model
. DMPK coordinator, responsible for ADME/PK screening decisions and SAR
analysis, initiated whole blood PK studies, re-evaluated CYP assay for
optimizing ADME profile
. Worked with CRO companies in Asia monitoring chemistry progress and
solving chemistry issues and coordinating the internal and external
chemistry work to deliver on time; supervised two direct reports (one
MS and one Ph.D)
p38? Kinase Project:
. Proposed and synthesized p38? kinase inhibitors; optimized potency,
selectivity, solubility and DMPK profiles; key contributor in
generating two clinical compounds SCIO-469 (phase 2b) and SCIO-323
(phase 1) for treating rheumatoid arthritis and cancer
. Successfully produced preclinical candidate SCIO-087 with improved
solubility and PK profile as a back up scaffold, designed and
implemented synthetic route suitable for scale-up
Shaman Pharmaceuticals, S. San Francisco, CA Medicinal Chemistry
1996-1998
Scientist Diabetes Discovery Project:
. Developed efficient synthetic methods to prepare quindolone,
cryptolepine and anthranilic Acid analogues for SAR evaluation;
involved in writing and editing patents
. Designed, synthesized and scaled-up masoprocol analogues to support
preclinical development
Brandeis University, Waltham, MA
1992-1996
RA & TA, Department of Chemistry Advisor: Prof. Barry Snider
. First total synthesis of pyridoxatin and its analogues, effective free
radical scavengers
. First total synthesis of leporin A, an anti-insectan against the corn
earworm
. First synthesis of raikovenal, preraikovenal and epiraikovenal
. Taught undergraduate organic chemistry lab
EDUCATION
Ph.D. and M.S. Synthetic Organic Chemistry, Brandeis University, Waltham,
MA
B.S. Pharmaceutical Chemistry, East China Univ. of Sci. & Tech. Shanghai,
P.R. China
PATENTS
1) Moser, H; Lu, Q.; Patten, P.; Wang, D.; Kasar, R.; Kaldor, S.;
Patterson, B.; "Preparation of antibacterial agents" PCT Int. Appl.
(2008), WO 200-***-**** A2 20081218,
2) Mavunkel, B.; Perumattam, J.; Lu, Q; Dugar S.; Goyal, B.; Wang, D.;
Sarvajit C.; Luedtke, G.; Nashashibi, I.; Tester, R.; Tan, X.
"Azaindole derivatives as inhibitors of p38 kinase" Pub. No.:
US2005/0288299 A1, Pub. Date: Dec. 29, 2005
3) Sarvajit C.; Dugar S.; Lu, Q.; Luedtke, G.; Mavunkel, B.; Perumattam,
J.; Tester, R.; "Indole-type derivatives as inhibitors of p38 kinase"
PCT Int. Appl. (2004), WO 200-***-**** A2, pp117.
4) Mavunkel, B.; Sarvajit C.; Perumattam, J.; Dugar S.; Lu, Q.; Liang, X.
"Benzofuran derivatives as inhibitors of p38-alpha kinase" Pub. No.:
US 2003/0158417 A1, Pub. Date: Aug. 21, 2003
5) Luedtke, G.; Tester, R.; Dugar S.; Lu, Q; Perumattam, J.; Tan, X.;
"Indole-type inhibitors of p38 kinase" Pub. No.: US 2003/0100588 A1,
Pub. Date: May 29, 2003
6) Dugar S.; Perumattam, J.; Luedtke, G.; Tan, X.; Lu, Q; "Inhibitors of
p38 kinase" Pub. No.: US 2003/0092717 A1, Pub. Date: May 15, 2003
7) Mavunkel, B.; Sarvajit C.; Perumattam, J.; Sundeep D.; Lu, Q.; Liang,
X. "Indole-type derivatives as inhibitors of p38 kinase" PCT Int.
Appl. (2000), WO 200******* A1, 85 pp.
8) Bierer, D. E.; Moinet, G.; Dubenko, L. G.; Botton, G.; Patereau, G.;
Doare, L.; Kergoat, M.; Mesangeau, D.; Lu, Q. "Piperazine
Derivatives useful as Hypoglycemic Agents" PCT Int. Appl. (1999), WO
9931096 A1, 420 pp.
PUBLICATIONS
1) Tan, X; Tester, R. W.; Luedtke, G. R.; Chakravarty, S.; Mavunkel, B.
J.; Perumattam, J. J.; Lu, Q.; Nashashibi, I.; Jung, J.; Hu, Jie;
Liclican, A.; Almirez, R.; Tabora, J.; Tran, V.; Laney, M.; Levy, D.
E.; Dugar, S.; "Design and synthesis of piperazine-indole p38-alpha
MAP kinase inhibitors with improved pharmacokinetic profiles" Bioorg.
Med. Chem. Lett. 2010, 20, 828.
2) Mavunkel, B. J.; Perumattam, J. J.; Tan, X.; Luedtke, G. R.; Lu, Q.;
Lim, D.; Kizer, D.; Dugar, S.; Chakravarty, S.; Xu, Y. J.; Jung, J.;
Liclican, A.; Levy, D. E.; Tabora, J. "Piperidine-based heterocyclic
oxalyl amides as potent p38-alpha MAP kinase inhibitors" Bioorg. Med.
Chem. Lett. 2010, 20, 1059
3) Lu, Q.; Chen, Z.; Perumattam, J.; Wang, D-X.; Liang, W.; Xu, Y-J.; Do,
S.; Bonaga, L.; Higaki, J.; Dong, H.; Liclican, A.; Sideris, S.;
Laney, M.; Dugar, S.; Mavunkel, B.; Levy, D. E. "Aryl-Indolyl
Maleimides as Inhibitors of CaMKII ?: Part 3: Importance of the
indole orientation" Bioorg. Med. Chem. Lett. 2008, 18, 2399.
4) Levy, D.E; Wang, D-X.; Lu, Q.; Chen, Z.; Perumattam, J.; Xu, Y-J.;
Liclican, A.; Higaki, J.; Dong, H.; Laney, M.; Mavunkel, B.; Dugar,
S.; "Aryl-Indolyl Maleimides as Inhibitors of CaMKII ?: Part 1: SAR
of the Aryl Region" Bioorg. Med. Chem. Lett. 2008, 18, 2390.
5) Levy, D. E.; Wang, D-X.; Lu, Q.; Chen, Z.; Perumattam,J.; Xu, Y-J.;
Higaki, J.; Dong, H.; Liclican, A.; Laney, M.; Mavunkel, B.; Dugar,
S.; "Aryl-Indolyl Maleimides as Inhibitors of CaMKII ?: Part 2: SAR
of the Amine Tether" Bioorg. Med. Chem. Lett. 2008, 18, 2395.
6) Mavunkel, B.; Xu, Y-J.; Goyal, B.; Lim, Lu, Q.; Chen, Z.; Wang, D-X.;
Higaki, J.; Chakraborty, I.; Liclican, A.; Sideris, S.; Laney, M.;
Delling, U.; Catalano, R.; Higgins, L. S.; Wang, H.; Wang, J.; Feng,
Y.; Dugar, S.; and Daniel E. Levy, D. E.; "Pyrimidine-based
inhibitors of CaMKIId" Bioorg. Med. Chem. Lett. 2008, 18, 2404.
7) Brahn E; Schoettler N; Mavunkel B; Banquerigo ML; Medicherla S;
Stebbins EG; Lu Q; Perumattam J; Dugar S; Schreiner GF; Protter AA.;
"Regression of collagen-induced arthritis with an inhibitor of p38-
alpha MAP kinase" Arthritis and Rheumatism 2003 48(9,S): pS346-S347
8) Lu, Q.; Ubillas, R. P.; Zhou, Y.; Dubenko, L. G.; Dener, J. M.;
Bierer, D. B. "Synthetic Derivatives of Irlbacholine: A Novel
Antifungal Plant Metabolite Isolated from Irlbachia alata" J. Nat.
Prod. 1999, 62, 824.
9) Fort, D. M.; Litvak, J.; Lu, Q.; Phuan, P. W.; Cooper, R.; Bierer, D.
E. "Isolation and Unambiguous Synthesis of Cryptolepinone: An
Oxidation Artifact of Cryptolepine" J. Nat. Prod. 1998, 61, 1577.
10) Bierer, D.; Dubenko, L.; Zhang, P.; Lu, Q.; Imbach, P. A. et al.
"Antihyperglycemic Activity of Cryptolepine Analogues: an
Ethnobotanical Lead Structure Isolated from Cryptolepis Sanguinolenta"
J. Med. Chem. 1998, 41, 2754.
11) Bierer, D.; Fort, D. M.; Mendez, C. D.; Luo, J.; Imbach, P. A.;
Dubenko, L. G.; Gerber, E.; Lu, Q.; Zhang, P. et al. "Ethnobotanical-
directed Discovery of the Antihyperglycemic Properties of
Cryptolepine: its Isolation from Cryptolepis Sanguinolenta, synthesis
and in vitro and in vivo Activities" J. Med. Chem. 1998, 41, 894.
12) Snider, B. B.; Lu, Q. "Syntheses of Raikovenal, Preraikovenal, and
Epiraikovenal" Synthe. Commun. 1997, 27, 1583.
13) Snider, B. B.; Lu, Q. "Total Synthesis of Leporin A" J. Org. Chem.
1996, 61, 2839.
14) Snider, B. B.; Lu, Q. "Total Synthesis of Pyridoxatin" J. Org. Chem.
1994, 59, 8065.
15) Snider, B. B.; Lu, Q. "A Two-Step Synthesis of Pyridoxatin
Analogues" Tetrahedron Lett. 1994, 35, 531.
POSTERS AND PRESENTATION
1) Lopez, Z.; Gomez, M.; Kostrob, C.; Armstrong. E.; Miller, G.; Reyes,
N.; Lu. Q.; Moser, H.; Miller, L.; Halasohoris, S.; Mojgan. Z.; Heine,
H. S.; Patten, P. "Potency and efficacy of small molecule inhibitors
of the gram-negative bacterial enzyme LpxC against Yersinia Pestis and
other Enterobacteriaceae" Poster presentation, the Chemical and
Biological Defense Science and Technology (CBD S&T) Conference,
Dallas, Texas, November 2009
2) Lopez, Z.; Gomez, M.; Armstrong. E.; Miller, G.; Reyes, N.; Lu. Q.;
Moser, H.; Miller, L.; Halasohoris, S.; Mojgan. Z.; Heine, H. S.;
Patten, P. "Small molecule LpxC inhibitors of Burkholderia Mallei and
Burkholderia Pseudomallei: in vitro and in vivo potency and efficacy"
Poster presentation, the Chemical and Biological Defense Science and
Technology (CBD S&T) Conference, Dallas, Texas, November 2009
3) Lu, Q.; Mavunkel, B.; Sarvajit C.; Perumattam, J.; Luedtke, G.; Chen,
Z.; Xu, Y.; Dugar, S.; Protter, A.; Schreiner, G.; "SAR and
Biological Studies of Indole-type p38 Kinase Inhibitors" Poster
Presentation, Gordon Research Conference, Medicinal Chemistry, New
London, NH, Aug, 2005
4) Higaki, J.; Xu, Y.; Chakraborty, I.; Dong, H.; Laseki, M.; Laney, M.;
Levy, D. Lu, Q.; Mavunkel, B.; Dugar, S.; Higgins, L.; "Inhibition of
Calmodulin-dependant Kinase II?" Poster Presentation, Structural
Biology Symposium, Vanderbilt University, Tennessee, July. 2005
5) Dugar, S.; Mavunkel, B.; Sarvajit C.; Perumattam, J.; Luedtke, G.; Lu,
Q.; Chen, Z.; Xu, Y.; Protter, A.; Schreiner, G.; "p38? MAP kinase
inhibitors: From discovery to the clinic" Presentation, 229th ACS
National Meeting, San Diego, CA, March. 2005
6) Lu, Q.; Mavunkel, B.; Sarvajit C.; Perumattam, J.; Luedtke, G.; Chen,
Z.; Xu, Y.; Dugar, S.; Protter, A.; Schreiner, G.; "Discovery and
biological evaluation of p38? MAP kinase inhibitors SX-011" Poster
Presentation, 228th ACS National Meeting, Philadelphia, PA, Aug. 2004
7) Brahn. E.; Schoettler, Mavunkel, B.; Lu, Q.; Manquerigo, ML.;
Medicherla, S.; Stebbins, L.; Perumattam, J.; Dugar, S.; Schreiner,
DF.; Protter, AA. "Inhibition of Collagen-Induced Arthritis with an
Inhibitor of p38? MAP Kinase" Poster Presentation, American College of
Rheumatology, Orlando, Oct. 2003