Kamlesh Kumar Sahu, (Ph. D.)

B** Maman House, **/9 Kishan Garh,

Vasant Kunj, New Delhi, 110070, India

adi0xb@r.postjobfree.com

+91-817*******

kingbiotech

Education

Doctor of Philosophy (Ph.D.) in Computational Biology (2016) National Institute of Plant Genome Research (NIPGR), New Delhi, India Affiliated to: Jawaharlal Nehru University, New Delhi Thesis Topic: Mechanisms of Introgressive Breeding in Tomato Master of Technology (M. Tech.) in Biotechnology (2007 - 2009) West Bengal University of Technology, Kolkata (W.B.) Now known as “Maulana Abul Kalam Azad University of Technology” Master of Science (M. Sc.) in Biotechnology (2001 - 2003) Barkatullah University, Bhopal (M.P.)

Professional Experience

Research Associate, National Institute of Plant Genome Research (NIPGR) Jul 2020 - Oct 2020

Differential Gene Expression in Burkholderia gladioli (a phagocytic bacteria) and its mutants treated with Rhizoctonia solani (a fungus).

Research Associate, National Institute of Plant Genome Research (NIPGR) Jan 2020 - Mar 2020

Transcriptome analysis and DGEs in Arabidopsis thaliana with and without Bacterial and Fungal treatment.

Assistant Professor, National Council of Educational Research and Training (NCERT) Nov 2017 - Nov 2018

Content development of audio-visual educational programs, hosted live TV discussion program of Swayam Prabha #31 (Kishor Manch).

Research Associate, National Institute of Plant Genome Research (NIPGR) May 2016 - Mar 2017

Whole Genome comparison of wild and cultivated tomato strains by mapping and identification of variants.

Peer-Reviewed Publications

Sahu KK, Chattopadhyay D (2017) Genome-wide sequence variations between wild and cultivated tomato species revisited by whole genome sequence mapping. BMC Genomics 18:430 Gupta S, Nawaz K, Parween S, Roy R, Sahu KK, Pole AK, Khandal H, Srivastava R, Parida SK, Chattopadhyay D (2017) Draft genome sequence of Cicer reticulatum L., the wild progenitor of chickpea provides a resource for agronomic trait improvement. DNA Res. 24(1), 1-10 Suresh BV, Roy R, Sahu K, Misra G, Chattopadhyay D (2014) Tomato Genomic Resources Database: An Integrated Repository of Useful Tomato Genomic Information for Basic and Applied Research. PLoS ONE 9(1): e86387

Sahu Asha, Manna MC, Bhattacharjya S, Rahman MM, Mandal A, Thakur JK, Sahu Kamlesh, Bhargav VK, Singh UB, Sahu KP and Patra AK (2020) Dynamics of maturity and stability indices during decomposition of biodegradable city waste using rapo-compost technology. Applied Soil ecology. 155:103670

Research Skills

• Next Generation Sequencing (NGS), Genomics, Transcriptomics

• Differential Gene Expression, Heat Map, RNA Seq Analysis

• Comparative Genomics and Genomic Variants identification (SNPs MNVs, InDels, etc.)

• Assembly tools (MIRA, Newbler, SOAPdenovo, ABySS, Velvet, ALLPATHS-LG, etc.)

• Mapping tools (BWA, Bowtie, Novoalign, SOAP, CLCBio, SSAHA, MAQ, etc.)

• Alignment tools (BLAST, FASTA, HMMER, MUMmer, ClustalW, T-Coffee, MSA, etc.)

• Other tools: Cufflinks, TopHat, SAMtools, BEDTools, CLC Genomics Workbench, sniplay, Tassel, GATK, BLAST, Circos

• Programming Languages: UNIX/Linux, Shell scripts, Bash, R, Perl & Python

• Genome Browser, Web Server and Web Development Tools References

Dr. Debasis Chattopadhyay

Staff Scientist VII

National Institute of Plant Genome Research (NIPGR) Aruna Asaf Ali Marg, New Delhi, India

Ph: +91-11-267*****

E-mail: adi0xb@r.postjobfree.com, adi0xb@r.postjobfree.com

Dr. Manoj Prasad

Staff Scientist VII

NIPGR, New Delhi, India

Ph: +91-11-267*****

E-mail: adi0xb@r.postjobfree.com, adi0xb@r.postjobfree.com Dr. Alok Krishna Sinha

Staff Scientist VII

NIPGR, New Delhi, India

Ph: +91-11-267*****

E-mail: adi0xb@r.postjobfree.com, adi0xb@r.postjobfree.com

Contact this candidate